Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903391.1_cds_XP_016453435.1_47564
CDS Infomation

[gene=LOC107777799] [db_xref=GeneID:107777799] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016453435.1] [location=complement(join(89262..89879,90214..91122))] [gbkey=CDS]
Sequence

ATGGAAATGGAACTATCTTTTCTTCTTGGCGCTTTGCTTCTCCTTTTGCCCTTACTTGTC
ACTAAATGGTTCAAAGAGTGTAATAATAGAAGAAAATTGCCTCCAGGGCCTATGAAGCTC
CCATTCATAGGAAACATACACCAACTTGTCGACTGGAAATCATCTGAGTTACTACCACAT
CGTACTCTTGCCAAATTAGCCTCAAAACATGGACCTTTAATGCACATGAAACTCGGCGAA
CGTTCAGCCATTGTTGTTTCATCACCTCAAATGGTTAGAGAAGTGATGAGAAAACATGAT
CTCAATTTCACTAATCGACCGGTGCTTTTGGTTGGAAAGGAAATGTTTTATGATCATGCT
GACATGGGATTTTGTAACTATGGTGATTTCTGGAGACAAATGCGCAAAATTTGTATTCAG
GAACTCCTTAGTCATAAAAATATTCAGTCATTTTATCCCAAGATGTTTAATGAGATATCC
AATCTTGTTAGCTCAATTAAAGCTGATTCTGCTACTGGAGGCAGTCCAATCAACTTAACT
GAAACGTTGTCGTTGTATACGAATTCGGTTATTTGCAAAGCAAGTGTAGGCAGGGCTTGT
AAAAATCAGGGCTCTTTGATTGATATAATGAGAACAGTGGCTGGTTCAGCTGGAGTATTT
GATCTTGCCGATCTTTTTCCCTCAGTGAAGATAATTCATTTTTTGAGTGGATTAAAATAC
AAACTACGTAAAATGCACGACGAGGTTGATGTTCTTTTAGAAGAAATTATCAATGAACAT
GAATCCCATAATGGGAGTACTAATGGTGATCCCACAGAAGAAGATATAGTTGATGTTCTC
CTAAGGCTTCAAAAGAGTCAAGATTTTTCAATTCCTATCACAAGGGATAATATTAAGGCT
ATAATCATTGACTTGTTTGCAGGAGGATCTACAACTTCAGCATCAACAATGGAATGGGCT
TTCTCAGAACTAATGAAAAATCCCAAAATAATGAAAAAAGCACAAGATGAAGTGAGAGAA
GTTTTCAAAGGGAAATTAGAGGGAATTGATCAAACTGATATTCAGAAACTTAAGTACCTA
AAAATGGTAGTTAAGGAGACAGTAAGGTTTCATCCTTTAGCTCCACTATTAGCACCTAGA
GAATCAAGGGAAGAGTGTGAGATTAATGGCTATGTTATACCAAAAGGCACAATGGCCCTT
GTGAATTTTTGGGCAATTTCTAGGGATCCAAATTATTGGTCAAATCCTGAAACATTTGAT
CCAGAGAGATTTAATGAAAGTCACCTTGATTTTACTGGAGCTCATTTCGAGTTTACGCCA
TTTGGCACAGGAAGAAGAATTTGCCCTGGAATATCATTTTCAATGGCAACTGTGGAGCTT
AGTCTAGCACTATTACTCTACCATTTTGATTGGAAGCTTCCCAATGGAATGAATCCACAT
GAACTAGACATGACTGAGAAATTTGGCAATGCTCTTGAAAGGAAAAACAATTTGTACCTG
ATTCCTTTACCCTATGTTCATGCCTAA

Peptide Sequence

PEP ID

XP_016453435.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEMELSFLLGALLLLLPLLVTKWFKECNNRRKLPPGPMKLPFIGNIHQLVDWKSSELLPH
RTLAKLASKHGPLMHMKLGERSAIVVSSPQMVREVMRKHDLNFTNRPVLLVGKEMFYDHA
DMGFCNYGDFWRQMRKICIQELLSHKNIQSFYPKMFNEISNLVSSIKADSATGGSPINLT
ETLSLYTNSVICKASVGRACKNQGSLIDIMRTVAGSAGVFDLADLFPSVKIIHFLSGLKY
KLRKMHDEVDVLLEEIINEHESHNGSTNGDPTEEDIVDVLLRLQKSQDFSIPITRDNIKA
IIIDLFAGGSTTSASTMEWAFSELMKNPKIMKKAQDEVREVFKGKLEGIDQTDIQKLKYL
KMVVKETVRFHPLAPLLAPRESREECEINGYVIPKGTMALVNFWAISRDPNYWSNPETFD
PERFNESHLDFTGAHFEFTPFGTGRRICPGISFSMATVELSLALLLYHFDWKLPNGMNPH
ELDMTEKFGNALERKNNLYLIPLPYVHA

Transcript Sequence

Gene sequence data has not been registered.